I am aware that a single signal is not useful but, I am learning how to hook up the different cable, I am is still in that stage where you have to look back and forth for casble codes and ways to adapt the car picture versus the a monocylinder engine

Today I hook up the scope once again IN DC mode to the pulse generator, nothing abnormal about the signal, is just a magneto passing thru the pulse generator all I hope is to get this signal right before procceding any further, since all the future channels signals will most probable by reference to this signal.
As for the problem is question is as follows;
We have KTM 690 which comes equip with two ECU´s, one for EFI and a second that takes care of the FLY By Wire stepper motor.
The engine act normal until it reaches the operating temperature, from there on if you has to stop in a traffic light or slow down or try to cruise at part throttle the ignition advance get stuck in 57-60 degrees BTDC, resulting in a very high operating temp, engine refuses to accelerate, if you manage to gain speed in this advance mode and let go off the throttle it will lock the rear wheel for sure, imaging the 66HP mono cylinder acting like a 50cc four stroke scooter.

I have learned to get the engine out this situation by letting the engine reach redline(8000) in this full advance mode, let go of the throtlle, go down one gear if necessary and letting the revs settle down some and slam the throttle wide open.
Sorry, no dirty TB,
step motor TPS of by the book (Fly by wire)
Ignition TPS by the book
valve train lash by the book at 0.07 mm and 0.12mm
$2300 AKRAPOVIK exhaust,
compression OK
Injector OK
Thermostat OK
Need to test the coil with the scope, as soon as I learn how.
I suspect the problem resides in the FLY BY WIRE TPS or its step motor.
Like I said above I am brand new with this instrument

, I feel the need to go one signal at a time, to make sure I am getting coherent signals for each sensor.